Evolutionary biology professor explains how to ‘walk the Tree of Life’ – Phys.Org

Posted: Published on March 21st, 2017

This post was added by Dr P. Richardson

March 21, 2017 by Linda B. Glaser Harry Greene, professor of ecology and evolutionary biology, left, and Cissy Ballen, of the University of Minnesota, hold an osteoglossomorph, Arapaima, probably collected in Brazil by zoologist Louis Agassiz in the 1860s. Agassiz was a visiting professor at Cornell from 1867 to 1873. Credit: Cornell University

Pop quiz: Are crocodiles more closely related to lizards or to birds? The answer may surprise you. Although traditional taxonomy classifies birds separately, they are actually closely related to crocodilians, sharing such groupwide characteristics as nest construction, parental care, a four-chambered heart and acoustic communication.

Traditional taxonomy "is an exercise in memorization, and we don't want to use brain cells on labels," said Harry Greene, professor of ecology and evolutionary biology and Stephen H. Weiss Presidential Fellow. The traditional system, invented in 1758 by Linnaeus, uses a hierarchical system of kingdoms, phyla, class, order, family, genus and species to make sense of biodiversity. But with the millions of new species identified since the 18th century, the system has become unwieldy and often is misleading, as the crocodile-lizard-bird example shows.

Instead, Greene uses the 35-year-old evolutionary Tree of Life (TOL) classification system, which explains the diversity of life by matching and mapping relationships on a branching diagram or "tree." The tree shows the inferred evolutionary relationships, based on physical or genetic characteristics; those named on each "branch," the taxa, are believed to be descended from a common ancestor.

Greene and Cissy Ballen of the University of Minnesota have just published a paper in PLOS Biology, "Walking and Talking the Tree of Life: Why and How to Teach About Biodiversity," discussing why the evolutionary TOL approach to biodiversity is best, to what extent the traditional taxonomy is still used and how to teach TOL using an active learning approach.

The researchers said they were unsurprised to find the vast majority of university and high school level biology textbooks still present the traditional taxonomy (although the newest textbooks often describe at least some of the TOL system as well). Greene frequently fields requests for guidance on how to teach the TOL and where to find resources about it; such requests motivated him and Ballen to write their paper.

Greene has spent decades refining his approach to teaching the TOL, which he calls "walking and talking the Tree of Life." He uses about 145 names on the TOL as references to illustrate relationships across branch tips and the "nodes" that unite them, each name chosen carefully to aid in understanding and memory. One such aid, for the benefit of pre-med students, is a skull and crossbones symbol at the branch tip of each taxon that includes at least one human pathogen.

At Cornell, the TOL is taught as part of the Evolution and Biodiversity course in the Department of Ecology and Evolutionary Biology. Through the College of Arts and Sciences' Active Learning Initiative, Ballen was hired as a postdoctoral associate to help transition the course from a standard passive lecture format into an active learning structure, emphasizing collaborative in-class group work and discussion.

In the revised class format, students are given pre-lecture assignments that include video podcasts ("vodcasts") and textbook readings; class time is spent reinforcing this material through active learning exercises and class discussions. Other changes made to the course include pre-class quizzes, which serve as low-risk assessments of how well the students have absorbed the pre-lecture assignments; the use of i-Clickers in class; and a random-number generator that calls on different groups in the class to answer questions to encourage student engagement.

"Because of the open-mindedness and progressive thinking about teaching from the EEB faculty, they were open to everything," said Ballen.

Greene admits he was a skeptic at first. Although he was a big fan of i-Clickers, which he'd been using for years, flipping the class felt "faddish" to him.

"Field teaching is the original active learning," he said. "If you want to see students light up, get them muddy and put a salamander in their hand."

But after seeing the improvement in test scores with active learning, especially among underrepresented minorities, sitting in on the lectures and participating as a teacher, Greene is a convert: "I would never want to go back to traditional lectures."

Ballen agrees. In the active learning format, she explained, students are much more energized and responsive. "They stay alert and engaged. They talk more and there's a lot more laughter."

Explore further: Researchers create new tool that measures active learning in classrooms

More information: Cissy J. Ballen et al, Walking and talking the tree of life: Why and how to teach about biodiversity, PLOS Biology (2017). DOI: 10.1371/journal.pbio.2001630

Journal reference: PLoS Biology

Provided by: Cornell University

Researchers at San Francisco State University have developed a tool that for the first time can measure the extent to which instructors use innovative teaching methods by analyzing simple audio recordings of classroom sounds, ...

Starting out as a college freshman can be hard.

It may be time to tap the brakes a bit on the flipped classroom movement.

Physical chemistry students given most course content outside of the classroom scored 12% higher on exams than counterparts in more traditional classes where students listened to lectures, a new study by researchers at the ...

In large college science classes, active learning interventions improve achievement for everyone, but especially black and first-generation students, according to a new study from the University of North Carolina at Chapel ...

(PhysOrg.com) -- Interactive teaching methods significantly improved attendance and doubled both engagement and learning in a large physics class, according to a University of British Columbia study published today in Science.

The discovery of a chemical compound that halts the production of a small set of proteins while leaving general protein production untouched suggests a new drug search strategy: Find compounds that target undesired proteins ...

Pop quiz: Are crocodiles more closely related to lizards or to birds? The answer may surprise you. Although traditional taxonomy classifies birds separately, they are actually closely related to crocodilians, sharing such ...

A species of unicellular ciliate has found a special trick to make use of the cellular machinery in seemingly impossible ways. Researchers at the University of Bern have for the first time described a mechanism in detail ...

A promising vaccine target for the most deadly type of malaria has had its molecular structure solved by Institute researchers, helping in the quest to develop new antimalarial therapies.

New research supports the creation of more marine reserves in the world's oceans because, the authors say, fish can evolve to be more cautious and stay away from fishing nets.

Trees and other plants, from towering redwoods to diminutive daisies, are nature's hydraulic pumps. They are constantly pulling water up from their roots to the topmost leaves, and pumping sugars produced by their leaves ...

Please sign in to add a comment. Registration is free, and takes less than a minute. Read more

Continue reading here:
Evolutionary biology professor explains how to 'walk the Tree of Life' - Phys.Org

Related Posts
This entry was posted in Biology. Bookmark the permalink.

Comments are closed.